Notice: Temporary Suspension of New Experiment Creation
We have temporarily disabled the creation of new experiments as we are continuously running out of space. This issue has been impacting both uploads and downloads from FlowRepository. By taking this step, we aim to make downloads of existing data more reliable.
We apologize for the inconvenience and appreciate your understanding as we work on upgrading our hardware and improving the overall solution.
Thank you for your patience.

10 most popular datasets this month (based on downloads within the last month)


Experiment Name Repository ID Pubmed ID(s) Journal(s) FCS Files Illustrations Primary Researcher Project MIFlowCyt Score Updated
Flow cytometry data annotated by 4 independent individuals FR-FCM-Z8P9 97 1 Matei Ionita
Dec 2024
Determining the role of CD4+ and CD8+ T-cells in the LST response FR-FCM-Z6UG 8 1 Jalal Alshaweesh
Oct 2023
Systems-level immune profiling of patients with long COVID and convalescent controls using mass cytometry FR-FCM-Z76S 166 1 Lakshmikanth Tadepally
Feb 2024
A 33-color panel for phenotypic analysis of murine organ specific immune cells FR-FCM-Z4NB 12 1 Siyu Yang
Nov 2021
deVries-et-al-Gut-2019 dataset FR-FCM-Z24H 97 1 Natasja de Vries
Jun 2019
Spontaneous cytokine production from paired blood, tumor and non-involved lung from NSCLC patients FR-FCM-ZY9X [28475900] 27 1 Adeeb Rahman
Aug 2017
Comparison of EV characterization by commercial high-sensitivity flow cytometers and a custom single-molecule flow cytometer FR-FCM-Z5CM 25 1 James Kim
Mar 2024
Mass Cytometry of Peripheral Blood from Melanoma Patients Receiving anti-PD-1 FR-FCM-ZYDG [30413431] Cancerimmunologyresearchlogo 44 1 Allison Greenplate
Oct 2018
Dott, Culina et al: Standardized high-dimensional spectral cytometry protocol and panels for whole blood immune phenotyping in clinical and translational studies - healthy vs patient samples FR-FCM-Z6RB 32 1 Slobodan Culina
Nov 2025
AML, FlowCAP-II FR-FCM-ZZYA [23396282] [24407226] Cytalogo Natmetlogo Bioinformaticslogo 2872 4 Nima Aghaeepour
Jan 2013

10 most popular datasets (based on all time downloads)


Experiment Name Repository ID Manuscript(s) Journal(s) FCS Files Illustrations Primary Researcher Project MIFlowCyt Score Updated
FCS collection for software testing FR-FCM-ZZZ4 39 3 Ryan Brinkman Community datasets
Dec 2015
AML, FlowCAP-II FR-FCM-ZZYA [23396282] [24407226] [PMC3906045] Cytalogo Natmetlogo Bioinformaticslogo 2872 4 Nima Aghaeepour Community datasets
Jan 2013
HEUvsUE, FlowCAP-II FR-FCM-ZZZU [23396282] [PMC3906045] Natmetlogo 308 4 Nima Aghaeepour Community datasets
Jan 2013
Immune profiling of different human tumors coupled with murine reverse translational studies identify CD73 as a rational combinatorial target for GBM FR-FCM-Z2B3 200 1 Andrew Cornish
Dec 2019
HIV Progression, FlowCAP IV FR-FCM-ZZ99 766 3 Nima Aghaeepour Community datasets
Jul 2015
Safety / Immunogenicity of PENNVAX-B with / without IL12 DNA plasmid via electroporation in healthy adults FR-FCM-ZZ7U [23840043] [24382714] [PMC3733506] Cytalogo Jidlogo 470 1 Greg Finak
Mar 2014
Surface Marker Flow Cytometry in human eosinophils after glucocorticoid exposure FR-FCM-ZYND [29885264] Scientificdatanaturelogo 30 1 Michelle Makiya
Jul 2018
Comparison of clustering methods for high-dimensional single-cell flow and mass cytometry (CyTOF) data FR-FCM-ZZPH [27992111] [31099963] Cytalogo 14 1 Lukas Weber
Dec 2016
IDCRP's HIV Natural History Study FR-FCM-ZZZK [20001854] [18667932] [22383736] [23044634] [24407226] [PMC2939466] [PMC3315712] [PMC3726344] Jidlogo Jaidslogo Bioinformaticslogo 466 2 Nima Aghaeepour
Oct 2013
Determining the role of CD4+ and CD8+ T-cells in the LST response FR-FCM-Z6UG 8 1 Jalal Alshaweesh
Oct 2023